Information for 5-GCCACTGGAGGGCGTG (Motif 3)

A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G
Reverse Opposite:
A T G C C G T A A G T C C T A G G T A C A T G C A G T C A G C T A T G C A G T C C G T A A C T G A C G T A C T G A T C G A T G C
p-value:1e-18
log p-value:-4.258e+01
Information Content per bp:1.783
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.9 +/- 24.1bp
Average Position of motif in Background58.3 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCACTGGAGGGCGTG-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG----
GCCASCAGGGGGCGCYVNNG
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

KLF14/MA0740.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG---
-----AAGGGGGCGTGGCC
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCACTGGAGGGCGTG--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCCACTGGAGGGCGTG--
------RGKGGGCGKGGC
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG
--CACAGCGGGGGGTC
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG--
------AGTGGGCGTGGC
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG--
-------GGGGGCGTGGC
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG--
-------GGGGGCGTGGN
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCACTGGAGGGCGTG---
--NNNAAGGGGGCGGGNNN
 A T C G A T G C G T A C C G T A A G T C C G A T C T A G A T C G C T G A A C T G T A C G A C T G A G T C A C T G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C