Information for 7-TTGCATTTCT (Motif 13)

A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
Reverse Opposite:
C G T A T A C G T G C A T C G A T G C A G C A T C T A G G T A C G T C A T G C A
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.649
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif14.22%
Number of Background Sequences with motif4092.9
Percentage of Background Sequences with motif8.47%
Average Position of motif in Targets47.9 +/- 27.6bp
Average Position of motif in Background49.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTGCATTTCT
ACTTTCGTTTCT
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTTCT---
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TTGCATTTCT
TTCATTTGCATAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTTCT
ATTTGCATAT--
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATTTCT-
GTTTCACTTCCG
 A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGCATTTCT
GGGATTGCATNN--
 A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGCATTTCT
ATTTGCATAA--
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTTCT
ASTTTCACTTCC
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTGCATTTCT
AGTTTCAKTTTC
 A C G T A C G T A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGCATTTCT--
--GCATTCCAGN
 A C G T C A G T C A T G G A T C C G T A A C G T A G C T A C G T A T G C G C A T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G