Information for 2-ACATRARGCACACACT (Motif 3)

C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T C T A G A G C T A C T G A C G T C A T G A G T C A G C T C G A T G A C T T G C A A C G T A C T G A G C T
p-value:1e-11
log p-value:-2.718e+01
Information Content per bp:1.742
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 24.4bp
Average Position of motif in Background50.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACATRARGCACACACT---
---AGCGGCACACACGCAA
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACATRARGCACACACT---
---CGAAGCACACAAAATA
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ACATRARGCACACACT
----WAAGTAAAYA--
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACATRARGCACACACT
AACAGGAAGT-------
 A C G T C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ACATRARGCACACACT----
-----AAGAACATWHTGTTC
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACATRARGCACACACT
----AAAGTAAACA--
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACATRARGCACACACT
----AAAGTAAACA--
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACATRARGCACACACT----
-----VAGRACAKNCTGTBC
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ACATRARGCACACACT
ACAGGAAGTG------
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ACATRARGCACACACT
-----AAATAAACA--
 C T G A A G T C C G T A A C G T C T A G C G T A C T G A C T A G G A T C C G T A G T A C C T G A G A T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T