Information for 3-CACASMATAYTTG (Motif 8)

A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
Reverse Opposite:
A G T C C G T A G C T A C T G A A C G T T C G A A G C T A C G T A T C G C G A T A C T G A C G T T C A G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.763
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif42.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets48.0 +/- 26.6bp
Average Position of motif in Background51.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACASMATAYTTG
CGAAGCACACAAAATA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACASMATAYTTG
ATCACCCCAT-----
 A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACASMATAYTTG
CTCACACAATGGCGC
 A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CACASMATAYTTG
NWAACCACADNN------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CACASMATAYTTG
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACASMATAYTTG
ATCACCCCAC-----
 A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACASMATAYTTG
ATCACCCCAT-----
 A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACASMATAYTTG--
AACACTACCATTGTT
 A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACASMATAYTTG--
-----NACATATGGN
 A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CACASMATAYTTG
AAACCACAGC-------
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C T G C A T C G A A G C T T G C A A G C T C G A T A C G T A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T