Information for 4-CYCCTACCASTGTCTT (Motif 6)

A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
Reverse Opposite:
C G T A C G T A C T A G C G T A G T A C C G T A T A C G C G A T C T A G C T A G A C G T C G T A C A T G A C T G C T G A C T A G
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.720
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.4 +/- 25.8bp
Average Position of motif in Background54.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CYCCTACCASTGTCTT
NNNNTGCCAGTGATTG
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
------CCATTGTTTT
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CYCCTACCASTGTCTT
-----NCCATTGTTY-
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
------CCATTGTTYB
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CYCCTACCASTGTCTT--
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CYCCTACCASTGTCTT--
---------TTGACTTTT
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
------CCWTTGTY--
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
-----CTCATTGTC--
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
------CCTTTGTT--
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CYCCTACCASTGTCTT
------CCATTGTTC-
 A G T C G A C T G T A C G T A C A C G T G T C A A G T C A G T C C G T A A T G C A C G T A C T G C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T