Information for 1-CCAGGGCAGG (Motif 5)

T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
Reverse Opposite:
T G A C A G T C G A C T A T C G G T A C G T A C A G T C C A G T C A T G A T C G
p-value:1e-12
log p-value:-2.776e+01
Information Content per bp:1.644
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif16.73%
Number of Background Sequences with motif4202.4
Percentage of Background Sequences with motif8.67%
Average Position of motif in Targets50.7 +/- 26.9bp
Average Position of motif in Background50.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGCAGG
WDNCTGGGCA--
 A C G T A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGGCAGG-
ATGCCCGGGCATGT
 A C G T A C G T A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGGGCAGG
TNNGGGCAG-
 T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCAGGGCAGG-----
---SDGCAGGTGCNS
 T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGGGCAGG---
-CACAGCAGGGGG
 T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGCAGG
GTCCCCAGGGGA--
 A C G T A C G T A C G T A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAGGGCAGG
CAAGGHCANV
 T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGGCAGG
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGCAGG
BTCAAGGTCA--
 A C G T A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAGGGCAGG
CAAAGGTCAG-
 A C G T T A G C G T A C G T C A T C A G C A T G C A T G T A G C C T G A T C A G A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T