Information for 20-TCCTGGCAGTCGGGAT (Motif 47)

A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
Reverse Opposite:
C G T A A C G T A T G C A G T C G T A C C T A G G T C A A G T C A C G T A T C G A T G C A G T C C G T A A C T G A C T G G T C A
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 26.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCTGGCAGTCGGGAT
NNNTGGCAGTTGGTNN
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCTGGCAGTCGGGAT
-CTTGGCAA-------
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCCTGGCAGTCGGGAT
---TGGCAGTTGG---
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCCTGGCAGTCGGGAT
---TGGCAGTTGN---
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCTGGCAGTCGGGAT
-CACGGCAGTTGGTNN
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCCTGGCAGTCGGGAT
TNNGGGCAG-------
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCTGGCAGTCGGGAT
TTCCNGGAAG-------
 A C G T A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCCTGGCAGTCGGGAT
GSCTGTCACTCA----
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGGCAGTCGGGAT
NCTTCCNGGAAGNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCCTGGCAGTCGGGAT
-SCTGTCAVTCAV---
 A C G T A G T C A G T C A C G T A C T G A T C G A T G C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T