Information for 19-GGTACATTGTTTT (Motif 35)

C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
Reverse Opposite:
G T C A C G T A C T G A C G T A G T A C G T C A G T C A A C G T A C T G C A G T G T C A T G A C A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.711
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif89.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets38.5 +/- 24.4bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTACATTGTTTT
---CCATTGTTTT
 C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTACATTGTTTT
---CCATTGTTYB
 C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGTACATTGTTTT
--NCCATTGTTY-
 C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTACATTGTTTT---
NNNTCCTTTGTTCTNNN
 A C G T C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGTACATTGTTTT
-----ATTGTTA-
 C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTACATTGTTTT----
-TTCAATTGTTCTAAAA
 C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTACATTGTTTT
YDGHTACAWTGTADC
 A C G T A C G T C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTACATTGTTTT--
ANNTCCATTGTTCNNN
 A C G T C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTACATTGTTTT
TWGHWACAWTGTWDC
 A C G T A C G T C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTACATTGTTTT---
GGGAACATTGTGTTCCC
 A C G T C T A G A C T G A C G T G T C A A G T C T C G A A C G T C A G T C A T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C