Information for 3-CAGAGGGCCG (Motif 28)

T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G
Reverse Opposite:
A G T C T C A G A C T G A T G C A G T C A G T C A C G T A G T C G A C T A C T G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.856
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif64.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.5 +/- 27.2bp
Average Position of motif in Background53.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGCCG
AACAGATGGC--
 A C G T A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGAGGGCCG
CAAAGGTCAG
 T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGGCCG----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGAGGGCCG
-TNNGGGCAG
 T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGAGGGCCG---
-RGKGGGCGGAGC
 T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T A C G T A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGGGCCG--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAGAGGGCCG-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGAGGGCCG-
CAAGATGGCGGC
 A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGCCG
AACAGATGGT--
 A C G T A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGAGGGCCG-
CAAGATGGCGGC
 A C G T T G A C C T G A A C T G C G T A A C T G A C T G A T C G A G T C A G T C C T A G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C