Information for 13-AGRGGAAACGVGACAC (Motif 23)

C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
Reverse Opposite:
A T C G A C G T A T C G A G C T A G T C A C T G A T G C A C T G A C G T A C G T A C G T G T A C A G T C A G T C G T A C G C A T
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.739
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 26.3bp
Average Position of motif in Background46.8 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGRGGAAACGVGACAC
AGAGGAA---------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGRGGAAACGVGACAC
----GWAAYHTGAKMC
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGRGGAAACGVGACAC---
--GGGRAARRGRMCAGMTG
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C A C G T A C G T A C G T
A C G T A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGRGGAAACGVGACAC
--TGGAAAA-------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGRGGAAACGVGACAC
NNTGGAAANN------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGRGGAAACGVGACAC
AATGGAAAAT------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGRGGAAACGVGACAC
NNNNGGGGGAAGANGG----
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGRGGAAACGVGACAC
AATGGAAAAT------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGRGGAAACGVGACAC
GGAGGGGGAA--------
 A C G T A C G T C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGRGGAAACGVGACAC
NATGGAAAAN------
 C G T A A C T G C T A G A C T G C A T G C G T A C G T A C G T A T G A C T A C G T A G C C T A G C T G A T A G C C G T A T A G C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T