Information for 11-TGTRACATGATCATGT (Motif 20)

A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
Reverse Opposite:
C G T A A G T C G C T A A C G T A C T G C G T A A G C T A T G C C G T A A C G T C T A G G A C T A G T C C T G A A G T C G T C A
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.722
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 23.5bp
Average Position of motif in Background43.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTRACATGATCATGT
GGTCACATGAC-----
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTRACATGATCATGT
-GTCACATGAY-----
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTRACATGATCATGT
-GWAAYHTGABMC---
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTRACATGATCATGT
GGTCACGTGGC-----
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGTRACATGATCATGT
-----CATGAC-----
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTRACATGATCATGT
-GTCACGTGACYV---
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTRACATGATCATGT
CCGGTCACGTGA------
 A C G T A C G T A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGTRACATGATCATGT-
-----TATGCWAATBAV
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTRACATGATCATGT
AATATACATGTAAAATT
 A C G T A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

DUXA/MA0884.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGTRACATGATCATGT---
------NTGATTAAATTAN
 A C G T C T A G G A C T C T A G C G T A A G T C C G T A A C G T A T C G C T G A A C G T A G T C C G T A C A G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G