Information for 7-AVAAGACTCTTGA (Motif 12)

G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A T G C A C G T A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 18.2bp
Average Position of motif in Background61.5 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AVAAGACTCTTGA-
TAGAANVTTCTAGAA
 A C G T G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AVAAGACTCTTGA-
-GAANGTTCTAGAA
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AVAAGACTCTTGA----
-TAAGCCACTTGAAATT
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AVAAGACTCTTGA-
-GAACGTTCTAGAA
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AVAAGACTCTTGA-
-GAANNTTCTAGAA
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AVAAGACTCTTGA---
TACGAGACTCCTCTAAC
 A C G T G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AVAAGACTCTTGA----
-TAAGCCACTTGAAATT
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AVAAGACTCTTGA-
----NSCACTYVAV
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AVAAGACTCTTGA
---AASCACTCAA
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AVAAGACTCTTGA-
----RSCACTYRAG
 G T C A T A G C C G T A C G T A A T C G C G T A A G T C A C G T A G T C A C G T C G A T C T A G G T C A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G