Information for 5-YGTCTTCYWTWAA (Motif 10)

A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A C G T A C T G A A C T G C G T A C G T A A C T G C G T A A G T C C T A G
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.6 +/- 16.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YGTCTTCYWTWAA
--GCTTCC-----
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YGTCTTCYWTWAA-
NNNTTTCCTGGAAA
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YGTCTTCYWTWAA--
---TTTCCNGGAAAN
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YGTCTTCYWTWAA---
-NANTTCATTGAATTA
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---YGTCTTCYWTWAA
VBSYGTCTGG------
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YGTCTTCYWTWAA--
-NATTTCCNGGAAAT
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-YGTCTTCYWTWAA
ACGTCATC------
 A C G T A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YGTCTTCYWTWAA--
---TTTCTNAGAAAN
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YGTCTTCYWTWAA--
-NNCTTCCNGGAAGN
 A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----YGTCTTCYWTWAA
AGAAATGACTTCCCT---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C G T G T A C A G C T C G A T A C G T C G T A C G T A C G T A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T A C G T