Information for 3-CTAAGTATCTTCT (Motif 7)

A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A C G T A A C T G C G T A G A C T G T C A A G T C C G A T A C G T G T C A A T C G
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.7 +/- 18.4bp
Average Position of motif in Background40.7 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTAAGTATCTTCT
-------GCTTCC
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PH0154.1_Prrx1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTAAGTATCTTCT
GTAACTAATTAACTACT
 A C G T A C G T A C G T A C G T A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTAAGTATCTTCT
ADGGYAGYAGCATCT
 A C G T A C G T A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTAAGTATCTTCT---
--TNTTATCTTATCTT
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

POL005.1_DPE/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTAAGTATCTTCT
---NACATCTTN-
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTAAGTATCTTCT
--AAGGATATNTN
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTAAGTATCTTCT--
ACCCGTATCAAATTT
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTAAGTATCTTCT
-AATGTATCAAT-
 A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTAAGTATCTTCT-
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTAAGTATCTTCT-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A T G C A C G T C G T A C G T A C T A G A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T