Information for 20-GGTTARTKAWGWT (Motif 42)

A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T G T A C C G T A A C G T G T C A C G T A A G T C A C G T C G T A C T G A A G T C A G T C
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 14.3bp
Average Position of motif in Background39.9 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGTTARTKAWGWT-
NNCTNAATTATGANN
 A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PH0153.1_Prop1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTTARTKAWGWT--
CGAATTAATTAAGAAAC
 A C G T A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTTARTKAWGWT
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGTTARTKAWGWT
--TTAATTAN---
 A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTTARTKAWGWT
AATTAATTAGT--
 A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGTTARTKAWGWT
CTNNGNTAATTAACNT
 A C G T A C G T A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTTARTKAWGWT
ATATATTAATTAAGTA
 A C G T A C G T A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGTTARTKAWGWT
-GKTAATGR----
 A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTTARTKAWGWT
--TTAATTAA---
 A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T
A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGTTARTKAWGWT-
NNNAATTAATTAANGNG
 A C G T A C G T A C G T A C T G A C T G A G C T A C G T C G T A C T A G A C G T A C G T C G T A C G A T A C T G C G T A A C G T A C G T
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G