Information for 3-TTGCAAAATCATGCAT (Motif 4)

A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
Reverse Opposite:
G T C A A G C T A C T G A G T C C G T A A C G T T A C G G T C A A G C T A C G T A G C T A C G T C T A G G T A C G T C A G T C A
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 27.3bp
Average Position of motif in Background65.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTGCAAAATCATGCAT
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTGCAAAATCATGCAT
ATTGCACAATA------
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAAAATCATGCAT---
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAAAATCATGCAT
VTTRCATAAY-------
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTGCAAAATCATGCAT
----TGAATTATGCAT
 A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGCAAAATCATGCAT
TTGCAACATN------
 A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAAAATCATGCAT
GTTGCGCAAT-------
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTGCAAAATCATGCAT
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGCAAAATCATGCAT
ATGAATATTCATGAG-
 A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGCAAAATCATGCAT
-TGCTGAGTCATNNTG
 A C G T A C G T A C T G A G T C C G T A C T G A T G C A C T G A A C G T A T G C C G T A A C G T C T A G G T A C C T G A A C G T
A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G