Information for 13-ACATGCATGTACA (Motif 35)

C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A
Reverse Opposite:
A C G T T A C G G A C T C T G A A G T C C G T A A C G T C T A G A G T C G T C A A G C T A T C G A G C T
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.797
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.5 +/- 22.5bp
Average Position of motif in Background44.1 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACATGCATGTACA--
AYATGYATATGCATR
 C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACATGCATGTACA
--ATGMATATDC-
 C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACATGCATGTACA-
CTCATGAATATTCAT
 A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACATGCATGTACA
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACATGCATGTACA
ANTNTTACATGTATNTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACATGCATGTACA-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACATGCATGTACA---
AAAATACATGTAAAAAT
 A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACATGCATGTACA----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACATGCATGTACA----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACATGCATGTACA
ANTNNTACATGTANNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C T G A A C G T A C T G A G T C C G T A A C G T C T A G A G C T C T G A A T G C G T C A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T