Information for 12-GGCCTCATTTAAA (Motif 32)

A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
Reverse Opposite:
C G A T C G A T A C G T G T C A C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 26.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCTCATTTAAA---
GACNTCATTAATAANN
 A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCCTCATTTAAA-
-----NATTCAAAT
 A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCATTTAAA
CNAGGCCT--------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCTCATTTAAA
-AGCTCATTAT--
 A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCATTTAAA
AGGCCTAG------
 A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTCATTTAAA
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCTCATTTAAA
TNNNNGGTGTCATNTNT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCTCATTTAAA
---ANCGTTTANN
 A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCATTTAAA
NATGACATCATCNNN-
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCATTTAAA
ATGACATCATCNN--
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T A C C G T A A C G T A C G T A C G T C G T A C G T A C G T A
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T A C G T