Information for 11-TRTGCGMATARYA (Motif 31)

A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
Reverse Opposite:
A G C T C T G A A G T C A G C T C G T A A C G T A C T G A G T C A C T G G T A C C G T A A G C T C G T A
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.871
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 17.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TRTGCGMATARYA
TATGCAAAT----
 A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TRTGCGMATARYA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TRTGCGMATARYA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TRTGCGMATARYA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TRTGCGMATARYA
TTATGCAAAT----
 A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TRTGCGMATARYA
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TRTGCGMATARYA
TATGCAAAT----
 A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TRTGCGMATARYA
ATATGCAAAT----
 A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TRTGCGMATARYA
AATATGCAAATT---
 A C G T A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TRTGCGMATARYA
TTATGCAAATTA--
 A C G T A C G T C T G A A C G T A C T G A G T C A C T G G T A C C G T A A C G T C T G A C T A G A G C T C T G A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T