Information for 17-CGCAAAGGGGGCAGCC (Motif 24)

G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C G T A C T G A T G C A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C T A G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 25.1bp
Average Position of motif in Background32.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAGGGGGCAGCC
TGCGCATAGGGGAGGAG-
 A C G T A C G T G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCAAAGGGGGCAGCC--
-NNNAAGGGGGCGGGNNN
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGCAAAGGGGGCAGCC
-ACAAAGGNBCCT---
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CGCAAAGGGGGCAGCC--
-----AGGTGNCAGACAG
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CGCAAAGGGGGCAGCC
-----AGRGGTCA---
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGCAAAGGGGGCAGCC--
-GGCGAGGGGTCAAGGGC
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

KLF13/MA0657.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGCAAAGGGGGCAGCC--
CAAAAAGGGGCGTGGCAT
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAGGGGGCAGCC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CGCAAAGGGGGCAGCC
TGCCCNNAGGGCA---
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CGCAAAGGGGGCAGCC
-TGACANARRCCAGRC
 G A T C A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C T G C T A G A T C G A G T C G T C A A C T G A T G C A G T C
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C