Information for 8-RMTASTKYACAAT (Motif 21)

C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C G T C T G A G T C A C G T A A T C G A C G T C G T A A C T G A G C T
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 25.9bp
Average Position of motif in Background42.6 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:RMTASTKYACAAT
----GTAAACAAT
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RMTASTKYACAAT------
--TAGTGAACAATAGATTT
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:RMTASTKYACAAT-------
---NNTNNACAATGGGANNN
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:RMTASTKYACAAT---
-------GACAATGNN
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RMTASTKYACAAT------
--TNNAGAACAATANATNN
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RMTASTKYACAAT-----
-TCACGGAACAATAGGTG
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RMTASTKYACAAT------
--TNCNNAACAATTTTTNC
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RMTASTKYACAAT---
--NNCNNAACAATTNT
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RMTASTKYACAAT---------
AATAAAGAACAATAGAATTTCA
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RMTASTKYACAAT------
---AATGAACAATGGAATT
 C T G A G T A C A C G T C G T A A T C G A C G T A C G T A G C T C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T