Information for 9-AMATAGACAATKGACA (Motif 15)

C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
Reverse Opposite:
A C G T C T A G C A G T A G T C G T A C C G T A A C G T A C G T T A C G A C G T T A G C C G A T C G T A A G C T A C T G A C G T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.713
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 21.5bp
Average Position of motif in Background44.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AMATAGACAATKGACA
-----GACAATGNN--
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AMATAGACAATKGACA
----RAACAATGGN--
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AMATAGACAATKGACA--
-NNTNNACAATGGGANNN
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A A C G T A C G T
A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AMATAGACAATKGACA
-CTCACACAATGGCGC
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AMATAGACAATKGACA-
-AATGAACAATGGAATT
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AMATAGACAATKGACA
----GAACAATGG---
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AMATAGACAATKGACA---
----TGACANARRCCAGRC
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AMATAGACAATKGACA
---VRAACAATGG---
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AMATAGACAATKGACA
--GTAAACAAT-----
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AMATAGACAATKGACA-
TAGTGAACAATAGATTT
 C G T A T G A C T C G A C G A T C G T A A C T G C G T A A G T C C G T A G T C A A C G T C A T G C T A G G T C A A G T C C G T A A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T