Information for 1-AGAKGAGGTAAGCCTT (Motif 1)

C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G C T A G A G T C G A C T A C G T T C G A A T G C A G T C C G A T A G T C G T A C C G A T A G T C A G C T
p-value:1e-13
log p-value:-3.189e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 26.6bp
Average Position of motif in Background81.0 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAKGAGGTAAGCCTT
----CAGGTAAGTAT-
 C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAKGAGGTAAGCCTT
AAGATAAGATAACA---
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAKGAGGTAAGCCTT
CAGATAAGGN-------
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAKGAGGTAAGCCTT
NVAGATAAGR--------
 A C G T A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGAKGAGGTAAGCCTT
----AAGGCAAGTGT-
 C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGAKGAGGTAAGCCTT
NNGAGATAAGA--------
 A C G T A C G T A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGAKGAGGTAAGCCTT
NAGATAAGNN-------
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAKGAGGTAAGCCTT
AGATAAGA--------
 C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAKGAGGTAAGCCTT--
---NNGGCCACGCCTTTN
 C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGAKGAGGTAAGCCTT
ANAGATAAGAA-------
 A C G T A C G T C T G A A C T G C G T A A C T G T A C G C G T A A C T G A T C G A G C T G T C A C T G A A C T G G A T C G T A C C G A T A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T