Information for 6-KGTKCMCARGWAMAGY (Motif 6)

A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
Reverse Opposite:
C T G A G T A C A C G T A C G T A C G T C G A T A G T C A G C T A C G T A T C G C A G T A C T G G T A C C G T A A G T C G T A C
p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.820
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.7 +/- 16.9bp
Average Position of motif in Background50.4 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGTKCMCARGWAMAGY
ANTTCTCAGGAANNN-
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:KGTKCMCARGWAMAGY
-----CCAGGAACAG-
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KGTKCMCARGWAMAGY
--TTCTNNAGAANT--
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----KGTKCMCARGWAMAGY
NTNTATGTGCACATNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---KGTKCMCARGWAMAGY
GGGTGTGCCCAAAAGG---
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGTKCMCARGWAMAGY
HTTTCCCASG------
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KGTKCMCARGWAMAGY
--TGCCCAGNHW----
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KGTKCMCARGWAMAGY
--TTCCKNAGAA----
 A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--KGTKCMCARGWAMAGY
NNTTTGCACACGGCCC--
 A C G T A C G T A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----KGTKCMCARGWAMAGY
NNGTATGTGCACATNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C G T A C A T G C C G T A C T G A A C T G C G T A C G T A G T C A C G T A A C T G A G C T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T A C G T