Information for 5-MCKCCTYAGCCGGRGN (Motif 5)

G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G
Reverse Opposite:
A G T C A G T C A G C T G T A C T A G C A T C G A C T G A T G C A C G T C T A G C T G A C T A G T C A G G T C A A C T G A C G T
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.652
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif213.4
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets64.6 +/- 26.4bp
Average Position of motif in Background50.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN--
---NCCCCCCCGGGGGGN
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MCKCCTYAGCCGGRGN----
-----ATTGCCTGAGGCAAT
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN--
----CCCCCCCGGGGGNN
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN--
---ACCCCCCCGGGGGGN
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN-
-----WTGSCCTSAGGS
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:MCKCCTYAGCCGGRGN----
-----ATTGCCTGAGGCGAA
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:MCKCCTYAGCCGGRGN-
-----ATGCCCTGAGGC
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN--
-------NGCCTGAGGCN
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:MCKCCTYAGCCGGRGN----
-----ATTCCCTGAGGGGAA
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:MCKCCTYAGCCGGRGN--
---DCHCAGCAGGRGGCC
 G T C A G T A C A C G T A G T C A G T C G A C T A G T C T G C A T A C G A G T C A T G C A C T G C A T G C T G A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C