Information for 21-CACGGGCACC (Motif 41)

A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C A G T C A G T C A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.299e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background42.2 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACGGGCACC---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACGGGCACC
NGTGGGCAT-
 A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

Id2/MA0617.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGCACC
TCACGTGC---
 A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGCACC
ACACGTGC---
 A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGGGCACC
ACCACGTGCC--
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACGGGCACC
NGKCACGTGM---
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGGGCACC
GGCACGCGTC--
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACGGGCACC
CAAGGHCANV
 A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACGGGCACC
GGCACGTGCC--
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACGGGCACC
CACGTGBN--
 A G T C C G T A A G T C A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T