Information for 20-CAAGCTGATATTTCAA (Motif 38)

A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.992e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA--
-NNNCTGATATCTCNNNN
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA
--TGCTGTGATTT---
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAAGCTGATATTTCAA--
----CTAATATTGCTAAA
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAAGCTGATATTTCAA--
----CTAATATTGCTAAA
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA
NNATNTGATANNNNN-
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA
---GCAGTGATTT---
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCTGATATTTCAA
CCTGCTGAGH------
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA
CCAGCTGTTN------
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAAGCTGATATTTCAA--
-ANNNGGATATATCCNNN
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAAGCTGATATTTCAA
CAAGCTT---------
 A G T C C G T A C G T A A C T G A G T C A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T