Information for 16-CATGAGAATGTGG (Motif 30)

A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C G T A A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.992e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CATGAGAATGTGG-
--ACAGGATGTGGT
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGAGAATGTGG
WATGCAAATGAG-
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CATGAGAATGTGG
ATTTGCATAACAAAG---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATGAGAATGTGG
--NTGGAATGTN-
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATGAGAATGTGG
--NTGGAATGTG-
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATGAGAATGTGG
CSTGGGAAAD---
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CATGAGAATGTGG----
-----NNHTGTGGTTWN
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATGAGAATGTGG--
NTTNTATGAATGTGNNC
 A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATGAGAATGTGG
TATGCWAATBAV-
 A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CATGAGAATGTGG
ATTTGCATAACAATG---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T A C G T