Information for 3-DTDTTTCATTATCCCT (Motif 3)

C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
Reverse Opposite:
C T G A C T A G A T C G A C T G C G T A G C A T C T G A G T C A A C G T A C T G T C G A C G T A G T C A G A C T G T C A G A C T
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.714
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.0 +/- 23.4bp
Average Position of motif in Background66.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ATF4/MA0833.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:DTDTTTCATTATCCCT
-TATTGCATCATCC--
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
A C G T A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:DTDTTTCATTATCCCT
ATTTTCCATT------
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:DTDTTTCATTATCCCT
--ATTGCATCAT----
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:DTDTTTCATTATCCCT
--ATTGCATCAK----
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-DTDTTTCATTATCCCT
TCAGTTTCATTTTCC--
 A C G T C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:DTDTTTCATTATCCCT
-ACTTTCACTTTC---
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:DTDTTTCATTATCCCT
-AGTTTCAGTTTC---
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---DTDTTTCATTATCCCT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----DTDTTTCATTATCCCT
GTTTTGCTTTCACTTTCC--
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:DTDTTTCATTATCCCT-
--CTTTCANTATGACTV
 C G T A A C G T C G T A A C G T A C G T A G C T A G T C C G T A A C G T A G C T C G T A C G A T G T A C A T G C A G T C A G C T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C