Information for 11-TGATCCCAAC (Motif 27)

A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.992e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background68.1 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAC
ATAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGATCCCAAC-
--ATGCCAACC
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAC-----
ACTATGCCAACCTACC
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0014.1_Cphx/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAC---
ATGATCGAATCAAA
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGATCCCAAC--
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAAC
TTAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATCCCAAC
CTTAATCCC---
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAC--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCCAAC-
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAAC--
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G