Information for 12-CGCTGGGGTAACA (Motif 21)

A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A C G T C G T A A G T C A G T C A G T C A G T C C G T A C T A G A G T C A T C G
p-value:1e-4
log p-value:-9.884e+00
Information Content per bp:1.923
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif31.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.3 +/- 26.4bp
Average Position of motif in Background43.0 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-GATGGGGTATCATTTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGCTGGGGTAACA--
----AGGGTAACAGC
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-AATGGGGTATCACGTTT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-AATAGGGTATCATATAT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-AATAGGGTATCAATTAT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-GATAGGGTATCACTAAT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-GATAGGGTATCACTAAT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCTGGGGTAACA-----
-AATAGGGTATCAATATT
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCTGGGGTAACA
--ATGGGGTGAT-
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCTGGGGTAACA
--GTGGGGTGAT-
 A T G C A C T G A G T C A C G T A C T G A C T G A C T G C T A G A C G T G T C A C G T A A T G C C G T A
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T