Information for 11-GAATTANARAATW (Motif 20)

C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
Reverse Opposite:
C G A T C G T A G C A T A C G T A G T C A C G T A G T C A C G T C G T A G C T A A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.716
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets78.0 +/- 14.0bp
Average Position of motif in Background52.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GAATTANARAATW--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATTANARAATW--
CAATTGCAAAAATAT
 C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATTANARAATW--
-AAATAAGAAAAAAC
 C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A A C G T A C G T
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PAX4/MA0068.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAATTANARAATW
CTAATTAG------
 A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAATTANARAATW
CCGTATTATAAACAA
 A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAATTANARAATW
ACGAAAGCGAAAGT-
 A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAATTANARAATW
AAAAAATCAATAAT-
 A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAATTANARAATW
AAAGTAATTAGTGAAT-
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAATTANARAATW
--AATGGAAAAT-
 C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAATTANARAATW
AAAAAATCGATAAT-
 A C G T A C G T C T A G C G T A C G T A C G A T A C G T T G C A A C T G G T C A C T A G C G T A C G T A C G A T C G T A
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T