Information for 5-CTCMAGCTNRTAC (Motif 13)

G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
Reverse Opposite:
C T A G A G C T G T C A A G C T A C T G T C G A A C T G A G T C A G C T A C T G A T C G C G T A A C T G
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.657
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif270.4
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets54.0 +/- 33.8bp
Average Position of motif in Background48.7 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCMAGCTNRTAC
-TCAAGGTCATA-
 G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCMAGCTNRTAC
TTCAAGGTCAT--
 G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCMAGCTNRTAC
AGCCACTCAAG-------
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCMAGCTNRTAC
RSCACTYRAG-------
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTCMAGCTNRTAC
GGCTCYAKCAYC---
 A C G T A C G T G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCMAGCTNRTAC--
TATTCAAGGTCATGCGA
 A C G T A C G T G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCMAGCTNRTAC
-TCAAGGTCAT--
 G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTCMAGCTNRTAC
NSCACTYVAV-------
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCMAGCTNRTAC
BTCAAGGTCA---
 G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTCMAGCTNRTAC
NTCAAGGTCA---
 G T A C A C G T A T G C G T A C C T G A C T A G T G A C A G C T A G T C C T G A A C G T C T G A A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T