Information for 3-TCYTWAKYSCACM (Motif 10)

A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T A C T G A T C G C T A G G T A C A C G T C G A T C G T A C T A G A C T G C G T A
p-value:1e-6
log p-value:-1.536e+01
Information Content per bp:1.817
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 6.0bp
Average Position of motif in Background65.9 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCYTWAKYSCACM----
NTNTATGTGCACATNNN
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCYTWAKYSCACM
--TCCAATCCACA
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCYTWAKYSCACM----
NNGTATGTGCACATNNN
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCYTWAKYSCACM
-CTTAATCCC---
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCYTWAKYSCACM
-CCTAATCCGC--
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCYTWAKYSCACM--
---SSAATCCACANN
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCYTWAKYSCACM
--TTAAGTGC---
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCYTWAKYSCACM
--TTAATCCC---
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCYTWAKYSCACM
--CTAATKGV---
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TCYTWAKYSCACM
------ATCCAC-
 A C G T A G T C A G T C A C G T G C A T C G T A A C T G A G T C T A C G A G T C C G T A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T