Information for 1-CASSGCTKWMKGRMMY (Motif 1)

A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
Reverse Opposite:
T C A G A C G T A C G T A G C T A G T C G T C A A C G T C G A T G T A C C G T A A C T G A G T C A T G C A T C G A C G T A C T G
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.764
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 15.6bp
Average Position of motif in Background79.9 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CASSGCTKWMKGRMMY
---NGCTN--------
 A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CASSGCTKWMKGRMMY
GTCATGCHTGRCTGS---
 A C G T A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CASSGCTKWMKGRMMY
---TGCTGACTCA---
 A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CASSGCTKWMKGRMMY
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CASSGCTKWMKGRMMY
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CASSGCTKWMKGRMMY
AAAATGCTGACT-----
 A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CASSGCTKWMKGRMMY
CGTCACGCATGACTGCA--
 A C G T A C G T A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----CASSGCTKWMKGRMMY
NNGGCCACGCCTTTN------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CASSGCTKWMKGRMMY
AATTTGCTGAC------
 A C G T A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CASSGCTKWMKGRMMY
AACAGCTG--------
 A G T C C G T A T A C G A T C G A C T G A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T G A G T C A G T C A A G C T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T