Information for 5-GAAACAATAACAC (Motif 7)

A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G A T C G A T G T A C
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 27.4bp
Average Position of motif in Background71.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GAAACAATAACAC--
CAAACAACAACACCT
 A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAAACAATAACAC
-NAACAAT-----
 A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GAAACAATAACAC----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAAACAATAACAC
GTAAACAAT-----
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAAACAATAACAC
--AACAAT-----
 A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GAAACAATAACAC
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAAACAATAACAC----
--AAAAATAACAAACGG
 A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAACAATAACAC
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAAACAATAACAC
NTTNAGAACAATTA---
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAACAATAACAC-
AATGAACAATGGAATT
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C G T G T C A C G T A A G T C C G T A A G T C A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T