Information for 4-TATDAHDATATDA (Motif 6)

A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
Reverse Opposite:
A G C T G T C A C G T A G A C T G C T A G A C T G A C T C A T G A G C T G T C A C T G A A C G T G T C A
p-value:1e-6
log p-value:-1.505e+01
Information Content per bp:1.719
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif116.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.7 +/- 13.5bp
Average Position of motif in Background51.7 +/- 42.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TATDAHDATATDA
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TATDAHDATATDA
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TATDAHDATATDA
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TATDAHDATATDA
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATDAHDATATDA-
NNTNNCAATATTAG
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATDAHDATATDA-
NNTNNCAATATTAG
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TATDAHDATATDA
--TAATTAAATTA
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATDAHDATATDA-
--TAATTNVATTAN
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A A C G T
A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Phox2b/MA0681.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATDAHDATATDA
--TAATTAAATTA
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TATDAHDATATDA
--TAATTAAATTA
 A C G T G T C A A G C T C A G T T C G A G A T C C T G A C T G A C G A T C T G A A C G T C A G T C T G A
A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A