Information for 3-GGAAATTTTCCCM (Motif 5)

A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G T A C G T C G A C G T A T C G A C T G A C A G T A C G T A G C T A G T C G T A C
p-value:1e-6
log p-value:-1.603e+01
Information Content per bp:1.681
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif417.4
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets39.8 +/- 20.4bp
Average Position of motif in Background52.2 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAAATTTTCCCM
GGAAATTCCC---
 A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTTTCCCM
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAATTTTCCCM
GGAAATTCCC---
 A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTTTCCCM
NACAGGAAAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTTTCCCM
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGAAATTTTCCCM
TTAAGAGGAAGTTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGAAATTTTCCCM
AVCAGGAAGT-------
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATTTTCCCM
AACAAGGAAGTAA-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAAATTTTCCCM
AGAGGAA---------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGAAATTTTCCCM
NACAGGAAAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A G T C A A G C T A C G T G A C T A G C T A G T C G T A C A G T C G T A C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T