Information for 25-CACWSYGRMKYCR (Motif 40)

A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G C T A G G T A C A C G T A G T C A G T C T C A G A T G C C G T A A C T G A C G T A C T G
p-value:1e-2
log p-value:-5.138e+00
Information Content per bp:1.766
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif50.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets91.5 +/- 2.5bp
Average Position of motif in Background42.1 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACWSYGRMKYCR
-ACAAAGGNBCCT
 A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACWSYGRMKYCR
MRSCACTYAA------
 A C G T A C G T A C G T A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CACWSYGRMKYCR
TCAGTCTT------
 A C G T A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACWSYGRMKYCR
ATCCAC----------
 A C G T A C G T A C G T A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACWSYGRMKYCR----
-ACGATGACGTCATCGA
 A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CACWSYGRMKYCR----
NNNNTTGGCGCCGANNN
 A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CACWSYGRMKYCR
GGTCANNGTGACCTN-
 A C G T A C G T A C G T A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CACWSYGRMKYCR
-ACAAAG------
 A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CACWSYGRMKYCR
CTCACACAATGGCGC--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CACWSYGRMKYCR-
--CGGTGACGTCAC
 A G T C C G T A A G T C C G A T A T C G A G C T A C T G C T A G G T C A C A G T A G T C A G T C C T G A A C G T
A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C