Information for 11-GAAACCCCCT (Motif 33)

A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A C T G A C T G A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.949e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background38.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCCCCT
GGAAATCCCC-
 A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GAAACCCCCT
GGGAAATCCCCN
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCCCCT
GGAAATTCCC-
 A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCCCCT
GGAAANCCCC-
 A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GAAACCCCCT-----
AGGAGACCCCCAATTTG
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAACCCCCT
GGAAATTCCC-
 A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAAACCCCCT
ACTGAAACCA---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GAAACCCCCT-
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GAAACCCCCT-
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GAAACCCCCT-
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C