Information for 23-GAAAGGCCAGAAA (Motif 31)

A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.355e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background52.3 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGGCCAGAAA
ANGNAAAGGTCA----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAAGGCCAGAAA
CAAAGGTCAG---
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAAGGCCAGAAA
-CAAGGHCANV--
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAAGGCCAGAAA
---ATGCCAGACN
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAAAGGCCAGAAA-
---AAGCCATAAAA
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGGCCAGAAA----
-AAAGGTAATAAAATTT
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGCCAGAAA
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAAAGGCCAGAAA
--AAGGTCAC---
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGCCAGAAA
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAAGGCCAGAAA-----
-CAAATCCAGACATCACA
 A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A