Information for 1-TTCTTABACATCA (Motif 3)

A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
Reverse Opposite:
A C G T A C T G C T G A A C G T A C T G A C G T T A C G A C G T C G T A C G T A A T C G C G T A C G T A
p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif63.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets71.7 +/- 16.7bp
Average Position of motif in Background48.9 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCTTABACATCA
CCGTATTATAAACAA
 A C G T A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTCTTABACATCA
TTTCCTAGAAAGCA
 A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

BCL6B/MA0731.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTABACATCA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTABACATCA
TTTCTNAGAAAN--
 A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTCTTABACATCA-------
---TCACCCATCAATAAACA
 A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTABACATCA
NNNATTCCTCGAAAGN-
 A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCTTABACATCA-
ATGAATATTCATGAG
 A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTCTTABACATCA
WWATRTAAACAN--
 A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTABACATCA
NNTATANATATACN---
 A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTCTTABACATCA
---GTAAACAA--
 A C G T C G A T A T G C C G A T A C G T C G T A A C G T C G T A G T A C C G T A A G C T G T A C C G T A
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T