Information for 12-TCAAACTGTATGAATA (Motif 25)

A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCAAACTGTATGAATA-----
----NTTNTATGAATGTGNNC
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.59
Offset:9
Orientation:forward strand
Alignment:TCAAACTGTATGAATA---
---------ATGAATATTC
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAAACTGTATGAATA--
--ACTATGAATGAATGAT
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TCAAACTGTATGAATA---
---------ATGMATATDC
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCAAACTGTATGAATA-----
----AAAATATGCATAATAAA
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCAAACTGTATGAATA
----AATGTATCAAT-
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCAAACTGTATGAATA--
----TCTTTANTAATANN
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCAAACTGTATGAATA-
--CCATTGTATGCAAAT
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCAAACTGTATGAATA-
---NNTNTCATGAATGT
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.49
Offset:9
Orientation:forward strand
Alignment:TCAAACTGTATGAATA--------
---------ATGAATATTCATGAG
 A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G