Information for 9-TAGACATCACTCTTGG (Motif 23)

A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGACATCACTCTTGG
TCACCCATCAATAAACA
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAGACATCACTCTTGG
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGACATCACTCTTGG
--GYCATCMATCAT--
 A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TAGACATCACTCTTGG----
-----ACCACTCTCGGTCAC
 A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

NFE2/MA0841.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TAGACATCACTCTTGG
----CATGACTCATC-
 A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TAGACATCACTCTTGG
-RGCCATYAATCA---
 A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TAGACATCACTCTTGG
AAGGCGAAATCATCGCA--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TAGACATCACTCTTGG
-----ATGACTCAT--
 A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TAGACATCACTCTTGG
NATGACATCATCNNN--
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------TAGACATCACTCTTGG
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T