Information for 21-GGCAGAAATAGGA (Motif 21)

A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAATAGGA
KCCAAAAATAGC-
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCAGAAATAGGA
ATGCTAAAAATAGAA
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCAGAAATAGGA
DCYAAAAATAGM-
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCAGAAATAGGA
-CCAAAAATAG--
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAATAGGA
GCTAAAAATAGC-
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAGAAATAGGA---
----GWAAYHTGAKMC
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCAGAAATAGGA---
----GWAAYHTGABMC
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAAATAGGA--
AAACAGACAAAGGAAT
 A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAAATAGGA
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCAGAAATAGGA-------
----CTACTAGGATGTNNTN
 A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C