Information for 2-TTTGACATCAGGCVCG (Motif 2)

A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
Reverse Opposite:
G T A C T A C G A C G T A T C G G T A C A T G C C G A T A T C G G T C A A C G T A C T G A G C T A G T C C G T A C G T A C T G A
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.728
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 7.6bp
Average Position of motif in Background56.4 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
--TGACAGCTGTCA--
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
-TTGACAGG-------
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
--TGACAGCTGTCA--
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
-TTGACAGC-------
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGACATCAGGCVCG
--TGACACCTGTCA--
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
--TGACAGGTGTCA--
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
-ATGCCCTGAGGC---
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTGACATCAGGCVCG
-TTGACAG--------
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTGACATCAGGCVCG
-NTGCCCTTGGGCGN-
 A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTGACATCAGGCVCG
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T A G C T A C G T C G A T A C T G C T G A A G T C G T C A A C G T A T G C C G T A A T C G A C T G A T G C T A C G A T G C A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T