Information for 11-ACGTTTGGCAGCA (Motif 18)

C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A C G T A C G T A A G T C A C T G A C G T
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA
--NNTTGGCANN-
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA
---NTTGGCANN-
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACGTTTGGCAGCA
----TTGGCA---
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA
---CTTGGCAA--
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACGTTTGGCAGCA
----TTGACAGC-
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA--
---TTTGGCGGGAAA
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA
--GGTTGGCAT--
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA
---TGAGTCAGCA
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACGTTTGGCAGCA----
-GTATTGACAGCTNNTT
 C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTTGGCAGCA-
NGTAGGTTGGCATNNN
 A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T