Information for 6-CDGTTTCCCTGGA (Motif 11)

A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C C T G A A C T G A T C G A C T G C G T A G T C A C G T A A G T C G A C T A T C G
p-value:1e-5
log p-value:-1.239e+01
Information Content per bp:1.778
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets66.0 +/- 28.0bp
Average Position of motif in Background56.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CDGTTTCCCTGGA--
-GGTTGCCATGGCAA
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CDGTTTCCCTGGA--
-NGTTGCCATGGCAA
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CDGTTTCCCTGGA---
CGGTTGCCATGGCAAC
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CDGTTTCCCTGGA---
--GTTGCCATGGNAAC
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CDGTTTCCCTGGA---
-KGTTGCCATGGCAAC
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CDGTTTCCCTGGA
GCTGTTACCCT---
 A C G T A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CDGTTTCCCTGGA
--CTGTTCCTGG-
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CDGTTTCCCTGGA
--RYHYACCTGB-
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A
A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CDGTTTCCCTGGA------
----TTTCCTGGAAAGNNN
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CDGTTTCCCTGGA
CTGTTTAC-----
 A T G C C A G T A C T G A C G T A C G T C G A T G T A C A T G C A G T C A G C T A C T G A C T G G T C A
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T