Information for 1-AGTTYRGYSMYAWTKC (Motif 1)

C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C
Reverse Opposite:
A C T G G T C A C G T A C G T A A C G T C T A G A C T G A T G C C T G A A G T C A G C T C T A G C G T A C G T A A G T C C G A T
p-value:1e-12
log p-value:-2.930e+01
Information Content per bp:1.805
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.7 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGTTYRGYSMYAWTKC
--TTTGGCGCCAAA--
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGTTYRGYSMYAWTKC-
AGCTCGGCGCCAAAAGC
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGTTYRGYSMYAWTKC-
CCTTCGGCGCCAAAAGG
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

RARA::RXRA/MA0159.1/Jaspar

Match Rank:4
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGTTYRGYSMYAWTKC-
AGGTCACGGAGAGGTCA
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AGTTYRGYSMYAWTKC-----
-RTTKCADNNKRTTGCATNAN
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-AGTTYRGYSMYAWTKC-
AAAAATGGCGCCATTTTT
 A C G T C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.45
Offset:-3
Orientation:reverse strand
Alignment:---AGTTYRGYSMYAWTKC
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.45
Offset:-4
Orientation:reverse strand
Alignment:----AGTTYRGYSMYAWTKC
TGGCAGTTGN----------
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.44
Offset:0
Orientation:forward strand
Alignment:AGTTYRGYSMYAWTKC--
RGGTCADNNAGAGGTCAV
 C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C A C G T A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.44
Offset:-6
Orientation:reverse strand
Alignment:------AGTTYRGYSMYAWTKC
NNNNTGAATTCANNNC------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G A T A G T C C T G A A C T G A G C T A T C G G T A C A G T C C G T A C G A T A C G T A C G T A G T C
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T