Information for 1-MATKAGCCAATSA (Motif 1)

G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A
Reverse Opposite:
A G C T T A C G G T C A A C G T A C G T A C T G C T A G A G T C A G C T T G C A C T G A C G A T C A T G
p-value:1e-23
log p-value:-5.442e+01
Information Content per bp:1.642
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif259.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets50.9 +/- 25.8bp
Average Position of motif in Background45.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:MATKAGCCAATSA
-ACTAGCCAATCA
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-MATKAGCCAATSA-
AAATGGACCAATCAG
 A C G T G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.87
Offset:4
Orientation:forward strand
Alignment:MATKAGCCAATSA-
----AGCCAATCGG
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:MATKAGCCAATSA-------
--TGGACCAATCAGCACTCT
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.75
Offset:6
Orientation:forward strand
Alignment:MATKAGCCAATSA-
------CCAATCAA
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:MATKAGCCAATSA------
--CGACCCAATCAACGGTG
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:MATKAGCCAATSA
----TGCCAA---
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:MATKAGCCAATSA-
-----GACAATGNN
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MATKAGCCAATSA----
-AACAACCAATTAATTC
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.67
Offset:5
Orientation:forward strand
Alignment:MATKAGCCAATSA--
-----CCCAATTAGC
 G T A C G C T A G A C T A C G T T C G A T C A G G A T C A G T C C G T A T G C A A C G T A T G C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C